Sumários

Graphs and genetics

29 setembro 2015, 12:30 • Ana Teresa Correia de Freitas

Introduction to graph algorithms

- Motivation 
- Introduction to Graph Theory
- Eulerian & Hamiltonian Cycle Problems
- Benzer Experiment and Internal Graphs 

Sequence alignment

29 setembro 2015, 09:30 • Ana Teresa Correia de Freitas

- Pairwise sequence alignment

- Dynamic programming algorithm (Needlman wunsch, Smith- waterman)
- Clustal W example

Sequence alignment

28 setembro 2015, 14:00 • Ana Teresa Correia de Freitas

- Pairwise sequence alignment

- Dynamic programming algorithm (Needlman wunsch, Smith- waterman)
- Clustal W example

Multiple sequence alignment

28 setembro 2015, 12:30 • Ana Teresa Correia de Freitas

Alignment algorithms for multiple sequences

- Dynamic programming
- Greedy approach
- CLUSTAL W 

Exploring Genebank

22 setembro 2015, 17:00 • Ana Teresa Correia de Freitas

Introduction to Geneback formats, file formats, gene structure description.

Rosalind data and tools resources