Sumários

Metagenomics

6 outubro 2015, 12:30 • Ana Teresa Correia de Freitas

Introduction to metagenomics

Human microbiome
Computational pipelines

Sequence alignment laboratory

6 outubro 2015, 09:30 • Ana Teresa Correia de Freitas

Evaluation week of the first Lab exercise.


Sequence alignment laboratory

5 outubro 2015, 14:00 • Ana Teresa Correia de Freitas

Evaluation week of the first Lab exercise.


Graphs and genetics

5 outubro 2015, 12:30 • Ana Teresa Correia de Freitas

De novo assembly

De bruijn-graphs and its application to genome assembly.
Euler approach.

Sequence alignment

29 setembro 2015, 17:00 • Ana Teresa Correia de Freitas

- Pairwise sequence alignment

- Dynamic programming algorithm (Needlman wunsch, Smith- waterman)
- Clustal W example