Papers for discussion
1st week classes (14/09):

• 10 Steps
• Explain Bioinformatics

2nd week classes (21/09):

• Human microbiome
• BLAST algorithm
• Game MAX5 (http://gamestem.com/games/)

3rd week classes (28/09):

• CLUSTAL

4th week classes (05/10):

• deBruijn graphs
• Signature

5th and 6th weeks classes (12/10 and 19/10):

• NGS resequencing (Bowtie)

7th week classes (26/10):

• HMM for Gene Finding

8th week classes (02/11):

• Clustering - Kmeans
• Biclustering - Cheng&Church
• Biclustering survey

Attachments

• Cheng_Church2000.pdf
• bicluster_survey_2004.pdf
• k-means2002.pdf
• GeneFinding_HMM_2001.pdf
• Bowtie_paper.pdf
• Signature dishes _ The Economist.pdf
• deBruijnGenetics_2011.pdf
• CLUSTAL_1989.pdf
• Basic Local Alignment Search Tool_1990.pdf
• Explain_Bioinformatics_2014.pdf
• 10Steps_2013.pdf
• Must read: Human_microbiome
• Must read: 1000_Human_genome
• Must read: Sequencing