Sumários

Pairwise Alignment evaluation Lab

12 outubro 2017, 09:30 Ana Teresa Correia de Freitas

Evaluation of the pairwise alignment lab. Needleman-Wunsch, Smith-Waterman and CLUSTALW


Pairwise Alignment evaluation Lab

10 outubro 2017, 17:00 Ana Teresa Correia de Freitas

Evaluation of the pairwise alignment lab. Needleman-Wunsch, Smith-Waterman and CLUSTALW


String matching

10 outubro 2017, 12:30 Ana Teresa Correia de Freitas

Approximate pattern matching using suffix trees. Trie concept. Generalised Suffix Trees. Finding structured motifs.


Pairwise Alignment evaluation Lab

9 outubro 2017, 14:00 Ana Teresa Correia de Freitas

Evaluation of the pairwise alignment lab. Needleman-Wunsch, Smith-Waterman and CLUSTALW


String matching

9 outubro 2017, 12:30 Ana Teresa Correia de Freitas

Combinatorial Pattern Matching:

Naive Rabin-Karp
Matching with automate
Keyword trees
Suffix trees
Matching with suffix trees
Longest Common Substring