Palestra

25 novembro 2013, 12:30 • Ana Teresa Correia de Freitas

Palestra agendada para o Prof. Manuel Bicho da Faculdade de Medicina.

Clustering Gene Expression Data (Revision)

21 novembro 2013, 17:00 • Sara Madeira

Gene expression data.

Clustering. Hierarchical versus partitional algorithms.

Hierarchical clustering algorithm (HCA) using single link, complete link and average link.

Partitional clustering: k-means.

Exercise: using hierarchical clustering and k-means.

NOTA: ESTA AULA SUBSTITUI A AULA TEÓRICA DE 29 DE OUTUBRO.

Lab #6 - Clustering (10/14)

19 novembro 2013, 17:00 • Sara Madeira

Learning how hierarchical clustering and k-means work by solving a clustering problem by hand.

Using the Genesis software the analyse a real gene expression matrix. Clustering genes and patients to identify patients from two types of leukemia and groups of genes with expression patterns related to the disease type.

Biclustering Gene Expression Data (II)

19 novembro 2013, 12:30 • Sara Madeira

Biclustering gene expression time series.

CCC-Biclustering algorithm. 

Lab #6 - Clustering

19 novembro 2013, 09:30 • Sara Madeira

Learning how hierarchical clustering and k-means work by solving a clustering problem by hand.

Using the Genesis software the analyse a real gene expression matrix. Clustering genes and patients to identify patients from two types of leukemia and groups of genes with expression patterns related to the disease type.