Sumários
Genomic Tools_I
18 outubro 2018, 08:00 • Arsénio do Carmo Sales Mendes Fialho
NCBI Genome Database; Genome sequence projects; Pseudomonas genome database (find orthologs and paralogs genes; predict antimicrobial resistance genes and pathogen associated genes); ARDB (Antibiotic Resistance Genes Database); PHAST(Phage search tool)
Genomic Tools_II
17 outubro 2018, 12:30 • Arsénio do Carmo Sales Mendes Fialho
Comparative Genomics: MAGE - Microbial Genome Annotation System; MAGE basic functionalities; synteny maps.
Genomic Tools_I
15 outubro 2018, 11:00 • Arsénio do Carmo Sales Mendes Fialho
NCBI Genome Database; Genome sequence projects; Pseudomonas genome database (find orthologs and paralogs genes; predict antimicrobial resistance genes and pathogen associated genes); ARDB (Antibiotic Resistance Genes Database); PHAST(Phage search tool).
CW1 (part 2)
12 outubro 2018, 11:00 • Nuno Gonçalo Pereira Mira
CW1 (part 2): High-throughput genome sequencing: from a DNA sequence to a genome annotation (focusing annotation and the use of algorithms for SNP detection and for gene finding)
3rd generation sequencing methods
11 outubro 2018, 16:00 • Nuno Gonçalo Pereira Mira
3rd generation sequencing technologies: PacBio as a paradigmatic example.