Sumários

Probabilistic Models

18 outubro 2010, 12:30 Ana Teresa Correia de Freitas

Markov models and Hidden Markov models.

The CpG islands identification problem.

Fair bet casino problem.


Lab # 2 - Pairwise Sequence Alignment (I)

12 outubro 2010, 17:00 Sara Madeira

- Needleman-Wunsch Algorithm (global alignment)
- Smith-Waterman Algorithm (local alignment)


Sequence Alignment III

12 outubro 2010, 12:30 Sara Madeira

- Multiple Sequence Alignment
Dynamic Programming Approach
Greedy Search
Progressive Approach 
- CLUSTALW


LAB # 2 - Pairwise Sequence Aligment (I)

12 outubro 2010, 09:30 Sara Madeira

- Needleman-Wunsch Algorithm (global alignment)
- Smith-Waterman Algorithm (local alignment)


LAB # 2 - Pairwise Sequence Aligment (I)

11 outubro 2010, 17:00 Sara Madeira

- Needleman-Wunsch Algorithm (global alignment)
- Smith-Waterman Algorithm (local alignment)